Resources


Genome browser track data hubs

ChIP-sequencing data and other (epi) genomic data for visualization in the UCSC genome browser.

Xenopus track hub: X. tropicalis (v7.1, 9.0), X. laevis (v7.1, 9.1)
Mouse track hub: M. musculus mm10 assembly.

Protocols

ChIP protocol Xenopus embryos downloadPDF
ChIP-sequencing in Xenopus embryos. downloadPDF
ATAC-sequencing using Xenopus embryos. downloadPDF

Other X. tropicalis resources

Files Xenopus xt10 genome
ChIP-seq, RNA-seq and MethylCap-seq tracks (archive)
NimbleGen ChIP-chip microarray designs (archive)
Transcription start site and promoter collection (archive)



RU
Radboud University Faculty of Science Radboud Institute for Molecular Life Sciences Dept. Molecular Developmental Biology